I have three TD5 Injectors green top that i changed unnecessarily, (see my project thread) still available if you need one, dont what silly money so thats one potential problem sorted.
yes they need to be coded, but you will find someone on here local who will do it for a beer im sure, 5 min job.
The copper washers crush when fitting so cant really be reused (aware you have had em in and out a few times)
They should slide on to injector stems no bother, did you have any were a bit stiff to slide on? might have got a bit distorted when sliding them on etc, only takes a knats cock out of true to cause a problem, very gentle cleaning of injector steams ( non abrasive ) before sliding them on etc
copper is a bit odd it will bend and crush 'once' then needs to be annealed (heated) to reverse bend etc. with washers its not worth it just cos you need then perfectly flat so unless you got a engineering flat press forget it, and fit new uns,
Again they a bit hit n miss, so go original.
engine should be fine they very tough etc, it ran ok for a bit yes? so that means its a fixable thing you wont have done any damage.
you will ave the cleanest sump and oil galleries ever after all this, so the positive is its hade a deep internal clean is all,
stay positive buddy !