Dear Lars,
I am having recently the same issues with my Defender TD5 (1999):
1. Revs continue to climb up for 2 seconds when i shift gears, especially from 2nd to 3rd
2. The throttle is extremely sensitive at low RPM (1000-1500)
3. The kangarooing effect is driving me crazy! and most sensed at 1st, 2nd and 3rd gear
4. When in low gear these all issues are increased dramatically
5. The engine smokes a bit more than usual since it all started
6. Cleaned all sensors (MAF, MAP, AAP) except CKP
After reading your excellent investigation, i thought i might focus on the clutch switch sensor.
I do admit it's kind of hard to imagine why these issues are encountered when the muffler is refitted....mine is still on, but i am thinking of disconnecting it for the sake of testing/eliminating causes.
Your thoughts and insights are most appreciated!
thanks,
Avner